Stem-loop bta-mir-2406

Accession

MI0011449

Description

Bos taurus bta-mir-2406 precursor miRNA

Sequence

162 reads, 1.0 reads per million, 68 experiments

gguagaAAGGGAAGAAGGAAGCUGGAUuugugaccacuuuggguuucugugaUACAGCUCUUCCCCUUCUUCC
((.((((.(((((((.....((((..((.(.((((......)))).)...))..))))))))))).)))).))

Structure

  u    A       AGGAA    GA  --u u    ac 
gg agaA GGGAAGA     GCUG  Uu   g gacc  u
|| |||| |||||||     ||||  ||   | ||||   
CC UCUU CCCUUCU     CGAC  ag   c uugg  u
  U    C       -----    AU  ugu u    gu 

Annotation confidence Medium

Genome context

29: 42245856-42245928 [+]

Mature bta-miR-2406-5p

• Accession: MIMAT0011964
• Description: Bos taurus bta-miR-2406-5p mature miRNA
• Sequence: 7 - AAGGGAAGAAGGAAGCUGGAU - 27
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2406-3p

• Accession: MIMAT0050935
• Description: Bos taurus bta-miR-2406-3p mature miRNA
• Sequence: 53 - UACAGCUCUUCCCCUUCUUCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349