Stem-loop bta-mir-2300b

Accession

MI0011311

Description

Bos taurus bta-mir-2300b precursor miRNA

Literature search

1 open access papers mention bta-mir-2300b
(1 sentences)

Sequence

2230 reads, 2.0 reads per million, 171 experiments

ucuuauuccUUAGCUAGUUUUGCCUCCCUGcuuaugaucacacacaGGGAGACAAAACUAGCUGAGGAauaaga
((((((((((((((((((((((.(((((((..............))))))).))))))))))))))))))))))

Structure

                      C       cuuaug 
ucuuauuccUUAGCUAGUUUUG CUCCCUG      a
|||||||||||||||||||||| |||||||       
agaauaAGGAGUCGAUCAAAAC GAGGGac      u
                      A       acacac 

Annotation confidence High

Genome context

12: 31797033-31797106 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2300b

Mature bta-miR-2300b-5p

• Accession: MIMAT0050914
• Description: Bos taurus bta-miR-2300b-5p mature miRNA
• Sequence: 10 - UUAGCUAGUUUUGCCUCCCUG - 30
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2300b-3p

• Accession: MIMAT0011810
• Description: Bos taurus bta-miR-2300b-3p mature miRNA
• Sequence: 47 - GGGAGACAAAACUAGCUGAGGA - 68
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026