Stem-loop sbi-MIR437l

Accession

MI0010912

Description

Sorghum bicolor sbi-MIR437l precursor miRNA

Literature search

3 open access papers mention sbi-MIR437l
(5 sentences)

Sequence

6317 reads, 270.0 reads per million, 49 experiments

gucaaacuuuguuaacauuGACCAAAUUUAUAGAAAAAugcaccaacagacaacaccaaauuaguuuaauuaaauuuuccauacaauaagcuuugauagagcaauuuuuugagaaguagauguuaauauauuuuucuaaaaacUUGGCCAAAGUUAGAGAAGUUUGacuu
((((((((((.(((((.(((.((((.(((.((((((((((....((((.......(((((...((((.(((((((((..........))).)))))).)))).....)))).).......))))....)))))))))).))).)))).))).))))).))))))))))..

Structure

--          g     a   A    A   A          cacc    gacaaca -    --uua    a      -   ucca 
  gucaaacuuu uuaac uuG CCAA UUU UAGAAAAAug    aaca       c caaa     guuu auuaaa uuu    u
  |||||||||| ||||| ||| |||| ||| ||||||||||    ||||       | ||||     |||| |||||| |||     
  caGUUUGAAG GAUUG AAC GGUU aaa aucuuuuuau    uugu       g guuu     cgag uaguuu gaa    a
uu          A     A   C    c   a          auaa    agaugaa a    uuuaa    a      c   uaac 

Annotation confidence Low

Genome context

chr2: 45977539-45977708 [+]

Mature sbi-miR437l-5p

• Accession: MIMAT0056435
• Description: Sorghum bicolor sbi-miR437l-5p mature miRNA
• Sequence: 20 - GACCAAAUUUAUAGAAAAA - 38
• Evidence: experimental ; unknown

Mature sbi-miR437l-3p

• Accession: MIMAT0011372
• Description: Sorghum bicolor sbi-miR437l-3p mature miRNA
• Sequence: 144 - UUGGCCAAAGUUAGAGAAGUUUG - 166
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556