Stem-loop sbi-MIR437i

Accession

MI0010909

Description

Sorghum bicolor sbi-MIR437i precursor miRNA

Literature search

3 open access papers mention sbi-MIR437i
(5 sentences)

Sequence

1576 reads, 72.0 reads per million, 50 experiments

guCAAACUUCUUUAACUUUGACCaaguuucuagaaaguuauauuaacaucuucaguaccaaauaaauguacuaucaagacauuugaugguggaucuaacaaaacuaauugaugguguagauaauggugcauuuuucuauaaacuuugucAAAGUUAGAGAAGUUUGACUU
((((((((((((((((((((((.((((((.((((((((((...)))).......((((((......(((((((((((....((((.(((.....))).)))).....))))))))))).....))))))...)))))).)))))).))))))))))))))))))))))..

Structure

--                      C      c      guuauauuaacaucuuca      aauaaa           -gaca    a   u 
  guCAAACUUCUUUAACUUUGAC aaguuu uagaaa                  guacca      uguacuaucaa     uuug ugg g
  |||||||||||||||||||||| |||||| ||||||                  ||||||      |||||||||||     |||| ||| g
  CAGUUUGAAGAGAUUGAAAcug uucaaa aucuuu                  cguggu      augugguaguu     aaac auc a
UU                      u      u      ---------------uua      -aauag           aauca    a   u 

Annotation confidence Medium

Genome context

chr1: 67375016-67375185 [+]

Mature sbi-miR437i-5p

• Accession: MIMAT0056432
• Description: Sorghum bicolor sbi-miR437i-5p mature miRNA
• Sequence: 3 - CAAACUUCUUUAACUUUGACC - 23
• Evidence: experimental ; unknown

Mature sbi-miR437i-3p

• Accession: MIMAT0011369
• Description: Sorghum bicolor sbi-miR437i-3p mature miRNA
• Sequence: 150 - AAAGUUAGAGAAGUUUGACUU - 170
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556