Stem-loop sbi-MIR395c

Accession

MI0010890

Description

Sorghum bicolor sbi-MIR395c precursor miRNA

Literature search

5 open access papers mention sbi-MIR395c
(32 sentences)

Sequence

15707 reads, 661.0 reads per million, 49 experiments

gaGUUCCCUACAAGCACUUCACGagaccuuggcuuaauaaaggguuguuuGUGAAGUGUUUGGGGGAACUCuu
(((((((((.((((((((((((((((((((..........))))))..)))))))))))))))))))))))..

Structure

--         A              --      ggcu 
  gaGUUCCCU CAAGCACUUCACGa  gaccuu    u
  ||||||||| ||||||||||||||  ||||||     
  CUCAAGGGG GUUUGUGAAGUGuu  uuggga    a
uu         -              ug      aaua 

Annotation confidence High

Genome context

Unknown

Mature sbi-miR395c-5p

• Accession: MIMAT0056419
• Description: Sorghum bicolor sbi-miR395c-5p mature miRNA
• Sequence: 3 - GUUCCCUACAAGCACUUCACG - 23
• Evidence: experimental ; unknown

Mature sbi-miR395c-3p

• Accession: MIMAT0011350
• Description: Sorghum bicolor sbi-miR395c-3p mature miRNA
• Sequence: 51 - GUGAAGUGUUUGGGGGAACUC - 71
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556