Stem-loop sbi-MIR156g

Accession

MI0010861

Description

Sorghum bicolor sbi-MIR156g precursor miRNA

Literature search

8 open access papers mention sbi-MIR156g
(28 sentences)

Sequence

8287938 reads, 47219.0 reads per million, 50 experiments

gUGACAGAAGAGAGUGAGCACacggccggcggaacggcaccggcggaugugccgucgcggccgcguGCUCACUGCUCUAUCUGUCAUCc
(((((((((((((((((((((.((((((.((..(((((((........))))))))))))))).))))))))).)))).))))))))..

Structure

--        -    -         a      g  ga       cgg 
  gUGACAGA AGAG AGUGAGCAC cggccg cg  acggcac   c
  |||||||| |||| ||||||||| |||||| ||  |||||||    
  UACUGUCU UCUC UCACUCGug gccggc gc  ugccgug   g
cC        A    G         c      -  --       uag 

Annotation confidence High

Genome context

chr4: 56252122-56252210 [-]

Mature sbi-miR156g-5p

• Accession: MIMAT0011321
• Description: Sorghum bicolor sbi-miR156g-5p mature miRNA
• Sequence: 2 - UGACAGAAGAGAGUGAGCAC - 21
• Evidence: not_experimental

Mature sbi-miR156g-3p

• Accession: MIMAT0056396
• Description: Sorghum bicolor sbi-miR156g-3p mature miRNA
• Sequence: 67 - GCUCACUGCUCUAUCUGUCAUC - 88
• Evidence: experimental ; unknown

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556