Stem-loop gga-mir-2129

Accession

MI0010734

Description

Gallus gallus gga-mir-2129 precursor miRNA

Sequence

12 reads, 0 reads per million, 4 experiments

gggaaggcugcagugggacaaggaccaggauacugcagugcugugacagCAGCAGGACUGGCUUUGUUACGAggagccucaccc
((..(((((.(..((..((((((.((((....((((..(((((...)))))))))..))))))))))..)).).)))))..)).

Structure

-  ga     g ag  gg      a    gaua    ag     u 
 gg  aggcu c  ug  acaagg ccag    cugc  ugcug  
 ||  ||||| |  ||  |||||| ||||    ||||  ||||| g
 cc  uccga g  GC  UGUUUC GGUC    GACG  ACgac  
c  ac     g -A  AU      -    --AG    --     a 

Annotation confidence Not enough data

Genome context

chr14: 4007738-4007821 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-2129

Mature gga-miR-2129

• Accession: MIMAT0011205
• Description: Gallus gallus gga-miR-2129 mature miRNA
• Sequence: 50 - CAGCAGGACUGGCUUUGUUACGA - 72
• Evidence: experimental ; Illumina [1], Northern [1]

References

1. PubMed ID: 19328789
   High throughput sequencing of microRNAs in chicken somites
   "Rathjen T, Pais H, Sweetman D, Moulton V, Munsterberg A, Dalmay T"
   "FEBS Lett (2009) 583:1422-1426