Accession
MI0010682
Description
Sus scrofa
ssc-mir-1 precursor miRNA
Literature search
47 open access papers mention ssc-mir-1
(281 sentences)
(281 sentences)
Sequence
305
reads,
86
reads per million, 14 experiments
ccgguugacguaccugcuugggggacauacuucuuuaugugcccauauggaccugcuaagcuaUGGAAUGUAAAGAAGUAUGUAuuucaggcugggaacucucaccgg
(((((.((.((.(((((((((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))))))).))).))))..)))))
(((((.((.((.(((((((((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))))))).))).))))..)))))
Structure
-u c a - g gc --- a
ccggu ga gu ccu gcuugggg acauacuucuuuaugu ccaua ugg c
||||| || || ||| |||||||| |||||||||||||||| ||||| ||| c
ggcca cu ca ggg cggacuuu UGUAUGAAGAAAUGUA GGUau auc u
cu - a u A -A cga g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr17: 69285393-69285500 [-]
Database links
Mature ssc-miR-1
| Accession | MIMAT0010187 |
| Description | Sus scrofa ssc-miR-1 mature miRNA |
| Sequence | 64 - UGGAAUGUAAAGAAGUAUGUA - 84 |
| Evidence |
experimental
454 [1], Illumina [2,4-5], cloned [3] |
References
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