Stem-loop bol-MIR172b

Accession

MI0010666

Description

Brassica oleracea bol-MIR172b precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

9 open access papers mention bol-MIR172b
(81 sentences)

Sequence

uguaggugcagcaccauuaagauucacauggaaauugagaaaacccuaauuuauauuaauuaggguucugauauguauaugAGAAUCUUGAUGAUGCUGCAUcaaca
(((.(((((((((.(((((((((((.((((.....(.(((..(((((((((......)))))))))))).)......)))).))))))))))).))))))))).)))

Structure

   a         c           a    -gaaau g   aa         ua 
ugu ggugcagca cauuaagauuc caug      u aga  acccuaauu  u
||| ||||||||| ||||||||||| ||||      | |||  |||||||||   
aca cUACGUCGU GUAGUUCUAAG guau      a ucu  ugggauuaa  a
   a         A           A    auguau g   --         uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature bol-miR172b

• Accession: MIMAT0010172
• Description: Brassica oleracea bol-miR172b mature miRNA
• Sequence: 82 - AGAAUCUUGAUGAUGCUGCAU - 102
• Evidence: not_experimental

References

1. PubMed ID: 18558089
   Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica
   "He XF, Fang YY, Feng L, Guo HS"
   "FEBS Lett (2008) 582:2445-2452