Stem-loop bol-MIR171a

Accession

MI0010664

Description

Brassica oleracea bol-MIR171a precursor miRNA

Literature search

6 open access papers mention bol-MIR171a
(11 sentences)

Sequence

acaaugcgagauauuggugcgguucaaucagaaauccacacucuuuuguuguagagaucgguuuguuugaUUGAGCCGUGCCAAUAUCACGagugu
......((.(((((((((((((((((((((((...((...((((........))))...))....))))))))))))))))))))))).)).....

Structure

acaaug  a                       -aau  aca    uuu 
      cg gauauuggugcgguucaaucaga    cc   cucu   g
      || |||||||||||||||||||||||    ||   ||||    
      GC CUAUAACCGUGCCGAGUUaguuu    gg   gaga   u
-uguga  A                       guuu  cua    ugu 

Annotation confidence Low

Genome context

Unknown

Mature bol-miR171a

• Accession: MIMAT0010170
• Description: Brassica oleracea bol-miR171a mature miRNA
• Sequence: 71 - UUGAGCCGUGCCAAUAUCACG - 91
• Evidence: not_experimental

References

1. PubMed ID: 18558089
   Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica
   "He XF, Fang YY, Feng L, Guo HS"
   "FEBS Lett (2008) 582:2445-2452