Stem-loop mcpv-mir-P1

Accession

MI0010647

Description

Merkel cell polyomavirus mcpv-mir-P1 precursor miRNA

Sequence

aggugccauacguucUGGAAGAAUUUCUAGGUACACUgguuccauugggUGUGCUGGAUUCUCUUCCUGAAuugguggucuccu
(((.(((((..((((.((((((...(((((.((((((.(......).)))))))))))...)))))).))))..)))))..)))

Structure

   -u     ac    U      AUU     G      g uu 
agg  gccau  guuc GGAAGA   UCUAG UACACU g  c
|||  |||||  |||| ||||||   ||||| |||||| |   
ucc  uggug  uAAG CCUUCU   AGGUC GUGUgg u  c
   uc     gu    U      CUU     -      g ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature mcpv-miR-P1-5p

• Accession: MIMAT0010150
• Description: Merkel cell polyomavirus mcpv-miR-P1-5p mature miRNA
• Sequence: 16 - UGGAAGAAUUUCUAGGUACACU - 37
• Evidence: experimental ; cloned [1]

Mature mcpv-miR-P1-3p

• Accession: MIMAT0010151
• Description: Merkel cell polyomavirus mcpv-miR-P1-3p mature miRNA
• Sequence: 50 - UGUGCUGGAUUCUCUUCCUGAA - 71
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19046593
   Merkel cell polyomavirus encodes a microRNA with the ability to autoregulate viral gene expression
   "Seo GJ, Chen CJ, Sullivan CS"
   "Virology (2009) 383:183-187