miRBase entry: ame-mir-252a

Stem-loop ame-mir-252a

Accession

MI0010608

Description

Apis mellifera ame-mir-252a precursor miRNA

Literature search

2 open access papers mention ame-mir-252a
(2 sentences)

Sequence

aauccugucuuguucAUAAGUACUAGUGCCGCAGGAGugacuagguuggguuagaaauuaccauaucuccugcugcucaagugcuuaucaauggguccgg
...((.(.((((((.(((((((((.(.((.(((((((.......((..(((........)))..))))))))).)).).))))))))).)))))).).))

Structure

aau  u u      c         A U  C       ugacuag  ug   uag 
   cc g cuuguu AUAAGUACU G GC GCAGGAG       gu  ggu   a
   || | |||||| ||||||||| | || |||||||       ||  |||    
   gg c ggguaa uauucguga c cg cguccuc       ua  cca   a
---  c u      c         a u  u       -------  ua   uua

Annotation confidence Not enough data

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Genome context

CM000066.5: 7005854-7005953 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ame-mir-252a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ame-miR-252a-5p

Accession	MIMAT0010113
Description	Apis mellifera ame-miR-252a-5p mature miRNA
Sequence	16 - AUAAGUACUAGUGCCGCAGGAG - 37
Evidence	experimental Illumina [2]

References

PubMed ID: 22409512
Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
"Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
"Genes Brain Behav (2012) 11:660-670