Stem-loop tca-mir-993

Accession

MI0010588

Description

Tribolium castaneum tca-mir-993 precursor miRNA

Sequence

ggcacauccgugaucUACCCUGUAGAUCCGGGCUUuuguagaauuuuuagaucaGAAGCUCGUCUCUACAGGUAUCUuacggauggaa
....(((((((((..((((.((((((..((((((((((..............))))))))))..))))))))))..)))))))))...

Structure

ggca         uc    C      UC          uagaau 
    cauccguga  UACC UGUAGA  CGGGCUUuug      u
    |||||||||  |||| ||||||  ||||||||||       
    guaggcauU  AUGG ACAUCU  GCUCGAAGac      u
-aag         CU    -      CU          uagauu 

Annotation confidence Not enough data

Genome context

ChLG2: 8141702-8141789 [-]

Mature tca-miR-993-3p

• Accession: MIMAT0010094
• Description: Tribolium castaneum tca-miR-993-3p mature miRNA
• Sequence: 55 - GAAGCUCGUCUCUACAGGUAUCU - 77
• Evidence: experimental ; SOLID [1]

Mature tca-miR-993-5p

• Accession: MIMAT0019182
• Description: Tribolium castaneum tca-miR-993-5p mature miRNA
• Sequence: 16 - UACCCUGUAGAUCCGGGCUU - 35
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696