Stem-loop gma-MIR2108b

Accession

MI0010578

Description

Glycine max gma-MIR2108b precursor miRNA

Literature search

2 open access papers mention gma-MIR2108b
(2 sentences)

Sequence

2889 reads, 79.0 reads per million, 175 experiments

guuuuaAUGUGUUGUGUUUGUGagaaccccugauuacauuuuUGUUAAGCGCAGCGAGUUUUAGGGC
(((((((..(((((((((((.(((((............)))))..)))))))))))....)))))))

Structure

       --UG           -U     ccccu 
guuuuaA    UGUUGUGUUUG  Gagaa     g
|||||||    |||||||||||  |||||      
CGGGAUU    GCGACGCGAAU  Uuuuu     a
       UUGA           UG     acauu 

Annotation confidence Low

Genome context

chr5: 19284064-19284130 [+]

Mature gma-miR2108b-5p

• Accession: MIMAT0010085
• Description: Glycine max gma-miR2108b-5p mature miRNA
• Sequence: 7 - AUGUGUUGUGUUUGUG - 22
• Evidence: experimental ; cloned [1]

Mature gma-miR2108b-3p

• Accession: MIMAT0054055
• Description: Glycine max gma-miR2108b-3p mature miRNA
• Sequence: 43 - UGUUAAGCGCAGCGAGUUUUAGGGC - 67
• Evidence: experimental ; unknown

References

1. PubMed ID: 19084500
   Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
   "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
   "Biochem Biophys Res Commun (2009) 378:799-803