Stem-loop gma-MIR1507b

Accession

MI0010573

Description

Glycine max gma-MIR1507b precursor miRNA

Literature search

19 open access papers mention gma-MIR1507b
(37 sentences)

Sequence

42922313 reads, 49906.0 reads per million, 178 experiments

guuugacAGAGAUGUAUGGAGUGAGAGAagggaaaugauauuuuccgaucccaucguuacucucuucccucUCUCAUUCCAUACAUCGUCUGAcgaac
(((((.((((((((((((((((((((((.(((((..((.......((((...))))....))..))))))))))))))))))))))).)))).)))))

Structure

     a    -                  a     au  uauuuuc    c 
guuug cAGA GAUGUAUGGAGUGAGAGA gggaa  ga       cgau  
||||| |||| |||||||||||||||||| |||||  ||       |||| c
caagc GUCU CUACAUACCUUACUCUcu cccuu  cu       gcua  
     A    G                  -     cu  ---cauu    c 

Annotation confidence High

Genome context

chr17: 5926147-5926244 [+]

Mature gma-miR1507b-5p

• Accession: MIMAT0054051
• Description: Glycine max gma-miR1507b-5p mature miRNA
• Sequence: 8 - AGAGAUGUAUGGAGUGAGAGA - 28
• Evidence: experimental ; unknown

Mature gma-miR1507b-3p

• Accession: MIMAT0010080
• Description: Glycine max gma-miR1507b-3p mature miRNA
• Sequence: 72 - UCUCAUUCCAUACAUCGUCUGA - 93
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 19084500
   Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
   "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
   "Biochem Biophys Res Commun (2009) 378:799-803


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153