Accession
MI0010533
Description
Physcomitrella patens
ppt-MIR2084 precursor miRNA
Sequence
2322
reads,
98.0
reads per million, 10 experiments
caguuacaaguaucuugaaauucguggaagcgCCUGCAUUGUUGGAUUGUGGAcuacaacggaggaguagccCACAAUCCAUCGAAGCAGGCGcuucaacgacuuucagauuuu
...........((((.((((.((((.(((((((((((.(((.((((((((((.((((.........)))).)))))))))).))).))))))))))).)))).))))))))...
...........((((.((((.((((.(((((((((((.(((.((((((((((.((((.........)))).)))))))))).))).))))))))))).)))).))))))))...
Structure
caguuacaagu u u g A U A aac
aucu gaaa ucgu gaagcgCCUGC UUG UGGAUUGUGG cuac g
|||| |||| |||| ||||||||||| ||| |||||||||| |||| g
uaga cuuu agca cuucGCGGACG AGC ACCUAACACc gaug a
--------uuu - c a A U c agg
Annotation confidence
Medium
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Genome context
Chr18: 9486736-9486849 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR2084
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR2084-5p
| Accession | MIMAT0010018 |
| Description | Physcomitrella patens ppt-miR2084-5p mature miRNA |
| Sequence | 33 - CCUGCAUUGUUGGAUUGUGGA - 53 |
| Evidence |
experimental
Illumina [1] |
Mature ppt-miR2084-3p
| Accession | MIMAT0053780 |
| Description | Physcomitrella patens ppt-miR2084-3p mature miRNA |
| Sequence | 73 - CACAAUCCAUCGAAGCAGGCG - 93 |
| Evidence |
experimental
unknown |
References
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