miRBase entry: bfl-mir-2068

Stem-loop bfl-mir-2068


Accession
MI0010506
Description
Branchiostoma floridae bfl-mir-2068 precursor miRNA


Sequence

guucuuCUUCCUAUGCACAUCUGUCCUUguaagcuggaggaGGACAUGUGUGCAUAGGGAAGAgaucagcuagccaaaucug
(.((((.(((((((((((((.(((((((.(.......).))))))).))))))))))))).)))).)...............

Structure
--------------- u    C             C       g aa 
               g ucuu UUCCUAUGCACAU UGUCCUU u  g
               | |||| ||||||||||||| ||||||| |  c
               c agAG AGGGAUACGUGUG ACAGGag a  u
gucuaaaccgaucga u    A             U       g gg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GG666480.1: 1589821-1589902 [-]

Database links

Mature bfl-miR-2068-5p

Accession MIMAT0009996
Description Branchiostoma floridae bfl-miR-2068-5p mature miRNA
Sequence 7 - CUUCCUAUGCACAUCUGUCCUU - 28
Evidence experimental
cloned [1], 454 [2]

Mature bfl-miR-2068-3p

Accession MIMAT0019170
Description Branchiostoma floridae bfl-miR-2068-3p mature miRNA
Sequence 42 - GGACAUGUGUGCAUAGGGAAGA - 63
Evidence experimental
454 [2]

References

  1. PubMed ID: 19196332
    Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
    "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
    "Evol Dev (2009) 11:41-49

  2. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27