miRBase entry: bfl-mir-2059

Stem-loop bfl-mir-2059


Accession
MI0010494
Description
Branchiostoma floridae bfl-mir-2059 precursor miRNA


Sequence

cauuuguguuggaccccuuuCAAGGCAAAUUGCUGCAAUACUuuguauccugcaagUAUUGCACUUUUUUGCUUUGAaaggu
...............((((((((((((((....((((((((((.(((...)))))))))))))....)))))))))))))).

Structure
cauuuguguuggacc              UUGC          u   u 
               ccuuuCAAGGCAAA    UGCAAUACUu gua  
               ||||||||||||||    |||||||||| ||| c
               ggaaAGUUUCGUUU    ACGUUAUgaa cgu  
--------------u              UUUC          -   c 


Annotation confidence Not enough data
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Genome context
GG666525.1: 1619205-1619286 [+]

Database links

Mature bfl-miR-2059-3p

Accession MIMAT0009985
Description Branchiostoma floridae bfl-miR-2059-3p mature miRNA
Sequence 57 - UAUUGCACUUUUUUGCUUUGA - 77
Evidence experimental
cloned [1], 454 [2]

Mature bfl-miR-2059-5p

Accession MIMAT0019168
Description Branchiostoma floridae bfl-miR-2059-5p mature miRNA
Sequence 21 - CAAGGCAAAUUGCUGCAAUACU - 42
Evidence experimental
454 [2]

References

  1. PubMed ID: 19196332
    Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
    "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
    "Evol Dev (2009) 11:41-49

  2. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27