Stem-loop bta-mir-376d

Accession

MI0010445

Description

Bos taurus bta-mir-376d precursor miRNA

Literature search

1 open access papers mention bta-mir-376d
(1 sentences)

Sequence

20726 reads, 8.0 reads per million, 286 experiments

gguauuuaaaagGUAGAUUUUCCUUCUAUGAUUAcggguuuggugauuaAUCAUAGAGGAAAAUCCACAUUuucgguaucaa
((((((.((((.((.(((((((((.(((((((((...(((....))))))))))))))))))))).)).)))).))))))..

Structure

--      u    g  A         U         cgg   u 
  gguauu aaaa GU GAUUUUCCU CUAUGAUUA   guu g
  |||||| |||| || ||||||||| |||||||||   |||  
  cuaugg uuUU CA CUAAAAGGA GAUACUAau   uag g
aa      c    A  C         -         ---   u 

Annotation confidence High

Genome context

21: 65929322-65929403 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-376d

Mature bta-miR-376d-5p

• Accession: MIMAT0050896
• Description: Bos taurus bta-miR-376d-5p mature miRNA
• Sequence: 13 - GUAGAUUUUCCUUCUAUGAUUA - 34
• Evidence: not_experimental

Mature bta-miR-376d-3p

• Accession: MIMAT0010199
• Description: Bos taurus bta-miR-376d-3p mature miRNA
• Sequence: 50 - AUCAUAGAGGAAAAUCCACAUU - 71
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39