miRBase entry: cfa-mir-802

Stem-loop cfa-mir-802


Accession
MI0010427
Description
Canis lupus familiaris cfa-mir-802 precursor miRNA


Sequence

239 reads, 4.0 reads per million, 25 experiments
uucuauuauuuguacUCAGUAACAAAGAUUCAUCCUUguguccgucaagcaacAAGGAGAAUCUUUGUCACUUAGuguaauuaauagcug
..((((((.(((((((.(((.((((((((((.(((((((((.......)).))))))))))))))))).))).))))))).))))))...

Structure
-uu      u       C   A          A       -  cc 
   cuauua uuguacU AGU ACAAAGAUUC UCCUUgu gu  g
   |||||| ||||||| ||| |||||||||| ||||||| ||  u
   gauaau aauguGA UCA UGUUUCUAAG AGGAAca cg  c
guc      u       U   C          -       a  aa 


Annotation confidence High
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Genome context
31: 30306239-30306328 [+]

Database links

Mature cfa-miR-802-5p

Accession MIMAT0009928
Description Canis lupus familiaris cfa-miR-802-5p mature miRNA
Sequence 16 - UCAGUAACAAAGAUUCAUCCUU - 37
Evidence not_experimental

Mature cfa-miR-802-3p

Accession MIMAT0051960
Description Canis lupus familiaris cfa-miR-802-3p mature miRNA
Sequence 54 - AAGGAGAAUCUUUGUCACUUAG - 75
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39