miRBase entry: lgi-mir-263b

Stem-loop lgi-mir-263b


Accession
MI0010125
Description
Lottia gigantea lgi-mir-263b precursor miRNA


Sequence

cguaaaccgguccgacagugAAUGGCACUGGUAGAAUUCACGGuguaaaccuuguguuccguggucuuccggugucauacauuguuagucggaagucagcu
......((((.(.(((((((.((((((((((.(((..((((((...............))))))))).)))))))))).))))))).))))).........

Structure
---cguaaa    u c       A          U   AU      uguaaa 
         ccgg c gacagug AUGGCACUGG AGA  UCACGG      c
         |||| | ||||||| |||||||||| |||  ||||||      c
         ggcu g uuguuac uacuguggcc ucu  ggugcc      u
ucgacugaa    - a       a          u   --      uugugu 


Annotation confidence Not enough data
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Genome context
KB203301.1: 756842-756942 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lgi-mir-263b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lgi-miR-263b

Accession MIMAT0009584
Description Lottia gigantea lgi-miR-263b mature miRNA
Sequence 21 - AAUGGCACUGGUAGAAUUCACGG - 43
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68