Stem-loop bfl-mir-217

Accession

MI0010040

Description

Branchiostoma floridae bfl-mir-217 precursor miRNA

Gene family

MIPF0000077; mir-217

Sequence

cugggacUACUGCAUCAGGAACUGAUUGGAugggauacaaaucaaucuguuccucaugcauggcucac
.((((.(((.(((((.((((((.((((((.((.....))..)))))).)))))).)))))))))))).

Structure

c    a   C     C      U      -A  g 
 uggg cUA UGCAU AGGAAC GAUUGG  ug g
 |||| ||| ||||| |||||| ||||||  || a
 acuc ggu acgua uccuug cuaacu  ac u
c    -   -     c      u      aa  a 

Annotation confidence Not enough data

Genome context

GG666479.1: 960802-960869 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-217

Mature bfl-miR-217

• Accession: MIMAT0009496
• Description: Branchiostoma floridae bfl-miR-217 mature miRNA
• Sequence: 8 - UACUGCAUCAGGAACUGAUUGGA - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68