Stem-loop bfl-mir-183

Accession

MI0010031

Description

Branchiostoma floridae bfl-mir-183 precursor miRNA

Gene family

MIPF0000066; mir-183

Sequence

ccacgugcccguucacggucUAUGGCACUGGUAGAAUUCACUgaucguagacaccagugauucuucagucagccauacaccguggcgggaaacugaucauc
.((.((.(((((.((((((.(((((((((((.(((((.(((((...........)))))))))))))))..)))))).)))))))))))..))))......

Structure

-----c  c  -g     u      c      --     U     U     aucg 
      ca gu  cccgu cacggu UAUGGC  ACUGG AGAAU CACUg    u
      || ||  ||||| |||||| ||||||  ||||| ||||| |||||    a
      gu ca  gggcg gugcca auaccg  ugacu ucuua gugac    g
cuacua  -  aa     -      c      ac     -     -     caca 

Annotation confidence Not enough data

Genome context

GG666602.1: 1108717-1108817 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-183

Mature bfl-miR-183

• Accession: MIMAT0009487
• Description: Branchiostoma floridae bfl-miR-183 mature miRNA
• Sequence: 21 - UAUGGCACUGGUAGAAUUCACU - 42
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68