miRBase entry: bfl-mir-182a

Stem-loop bfl-mir-182a


Accession
MI0010030
Description
Branchiostoma floridae bfl-mir-182a precursor miRNA


Sequence

aaucauuugggcuuaauuugCUUGGCACUAGUGGAAUUCUUUGuucaggaaacagugcauggagccauugagucaaagaauuccccaguaccaagcaaauu
..............(((((((((((.(((.(.(((((((((((((((((...((.....))...))..)))).)))))))))))).))).)))))))))))

Structure
aaucauuugggcuu           C   A U           -    --  aaa  g 
              aauuugCUUGG ACU G GGAAUUCUUUG uuca  gg   ca u
              ||||||||||| ||| | ||||||||||| ||||  ||   || g
              uuaaacgaacc uga c ccuuaagaaac gagu  cc   gu c
--------------           a   c -           u    ua  gag  a 


Annotation confidence Not enough data
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Genome context
GG666785.1: 120315-120415 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bfl-mir-182a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-182a

Accession MIMAT0009486
Description Branchiostoma floridae bfl-miR-182a mature miRNA
Sequence 21 - CUUGGCACUAGUGGAAUUCUUUG - 43
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68