Stem-loop bfl-mir-92b

Accession

MI0010023

Description

Branchiostoma floridae bfl-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Sequence

aagauacggcguuguugcuuAGGUCUGGACAGUUGCAAUCUUcguucuguuucagccgaaCAUUGCACUCGUCCCGGCCUGAgaaaccgcgccaauuuuca
.......(((((.(((.((((((((.(((((((.(((((.((((..(((...))).)))).)))))))).)))).)))))))).))).)))))........

Structure

-aagauac     u   g        U    -   U     C    uu   u 
        ggcgu guu cuuAGGUC GGAC AGU GCAAU UUcg  cug  
        ||||| ||| |||||||| |||| ||| ||||| ||||  ||| u
        ccgcg caa gAGUCCGG CCUG UCA CGUUA aagc  gac  
acuuuuaa     c   a        C    C   -     C    -c   u 

Annotation confidence Not enough data

Genome context

GG666522.1: 372710-372810 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-92b

Mature bfl-miR-92b-3p

• Accession: MIMAT0009479
• Description: Branchiostoma floridae bfl-miR-92b-3p mature miRNA
• Sequence: 61 - CAUUGCACUCGUCCCGGCCUGA - 82
• Evidence: experimental ; 454 [1]

Mature bfl-miR-92b-5p

• Accession: MIMAT0019143
• Description: Branchiostoma floridae bfl-miR-92b-5p mature miRNA
• Sequence: 21 - AGGUCUGGACAGUUGCAAUCUU - 42
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27