Stem-loop bfl-mir-31

Accession

MI0010017

Description

Branchiostoma floridae bfl-mir-31 precursor miRNA

Gene family

MIPF0000064; mir-31

Sequence

ugacggagggcgaggaaaUGGCAAGAUGUUGGCAUAGCUGUuuggaguucugggucggCUGUGCUGACAAACUGCCAUUUcccguucacuccuauuacaac
....((((((((.((((((((((...(((((((((((((((((((....))))).))))))))))))))...)))))))))))).)).)))).........

Structure

-----ugac    -  -  a          AGA              -     a 
         ggag gg cg ggaaaUGGCA   UGUUGGCAUAGCUG Uuugg g
         |||| || || ||||||||||   |||||||||||||| |||||  
         ccuc cu gc ccUUUACCGU   ACAGUCGUGUCggc ggguc u
caacauuau    a  u  -          CAA              u     u 

Annotation confidence Not enough data

Genome context

GG666694.1: 268453-268553 [-]

Mature bfl-miR-31-5p

• Accession: MIMAT0009473
• Description: Branchiostoma floridae bfl-miR-31-5p mature miRNA
• Sequence: 19 - UGGCAAGAUGUUGGCAUAGCUGU - 41
• Evidence: experimental ; 454 [1]

Mature bfl-miR-31-3p

• Accession: MIMAT0019141
• Description: Branchiostoma floridae bfl-miR-31-3p mature miRNA
• Sequence: 59 - CUGUGCUGACAAACUGCCAUUU - 80
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27