miRBase entry: bfl-mir-22

Stem-loop bfl-mir-22


Accession
MI0010014
Description
Branchiostoma floridae bfl-mir-22 precursor miRNA


Sequence

uacccugagaggcguAGCUCUUCAAACGGUAGCUCUGugguuaccugaucaAAGCUGCCAGAUGAAGAGCUGUgcuuccagggca
..(((((.((((((((((((((((...(((((((...(((((....))))).)))))))...)))))))))))))))))))))..

Structure
ua     a                AAC       CUG     a 
  cccug gaggcguAGCUCUUCA   GGUAGCU   ugguu c
  ||||| ||||||||||||||||   |||||||   |||||  
  gggac cuucgUGUCGAGAAGU   CCGUCGA   acuag c
ac     -                AGA       --A     u 


Annotation confidence Not enough data
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Genome context
GG666468.1: 2394933-2395017 [+]

Database links

Mature bfl-miR-22-3p

Accession MIMAT0009470
Description Branchiostoma floridae bfl-miR-22-3p mature miRNA
Sequence 52 - AAGCUGCCAGAUGAAGAGCUGU - 73
Evidence experimental
454 [1]

Mature bfl-miR-22-5p

Accession MIMAT0019138
Description Branchiostoma floridae bfl-miR-22-5p mature miRNA
Sequence 16 - AGCUCUUCAAACGGUAGCUCUG - 37
Evidence experimental
454 [2]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68

  2. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27