Stem-loop mmu-mir-1948

Accession

MI0009939

Symbol

MGI: Mir1948

Description

Mus musculus mmu-mir-1948 precursor miRNA

Literature search

1 open access papers mention mmu-mir-1948
(1 sentences)

Sequence

4208 reads, 12 reads per million, 67 experiments

auucucaccuuacuAUAUGAGUAUUCUGCCUAAAUgugguguacggauacaUUUAGGCAGAGCACUCGUACAGuaaggugagaau
((((((((((((((.(((((((.(((((((((((((((.........))))))))))))))).))))))).))))))))))))))

Structure

              A       A               gug 
auucucaccuuacu UAUGAGU UUCUGCCUAAAUgug   u
|||||||||||||| ||||||| |||||||||||||||   a
uaagaguggaauGA AUGCUCA GAGACGGAUUUacau   c
              C       C               agg 

Annotation confidence High

Genome context

chr18: 12714811-12714895 [+]

Mature mmu-miR-1948-5p

• Accession: MIMAT0017344
• Description: Mus musculus mmu-miR-1948-5p mature miRNA
• Sequence: 15 - AUAUGAGUAUUCUGCCUAAAU - 35
• Evidence: experimental ; 454 [2]

Mature mmu-miR-1948-3p

• Accession: MIMAT0009415
• Description: Mus musculus mmu-miR-1948-3p mature miRNA
• Sequence: 52 - UUUAGGCAGAGCACUCGUACAG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20668074
   Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
   "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
   "J Virol (2010) 84:10266-10275


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797