Stem-loop mmu-mir-1947

Accession

MI0009937

Symbol

MGI: Mir1947

Description

Mus musculus mmu-mir-1947 precursor miRNA

Literature search

2 open access papers mention mmu-mir-1947
(8 sentences)

Sequence

2689 reads, 8 reads per million, 81 experiments

gaacaaggugguggAGGACGAGCUAGCUGAGUGCUGcagacacucuaagaGCACUGAGCUAGCUCUCCCUCCaugcccugcucaa
((.((.((..(((((((..(((((((((.((((((..(((...)))...)))))).)))))))))..)))))))..)))).))..

Structure

--  a  a  ug       AC         G      -Gc   c 
  ga ca gg  guggAGG  GAGCUAGCU AGUGCU   aga  
  || || ||  |||||||  ||||||||| ||||||   ||| a
  cu gu cc  uaCCUCC  CUCGAUCGA UCACGa   ucu  
aa  c  -  cg       CU         G      gaa   c 

Annotation confidence Not enough data

Genome context

chr16: 33105361-33105445 [+]

Mature mmu-miR-1947-5p

• Accession: MIMAT0009413
• Description: Mus musculus mmu-miR-1947-5p mature miRNA
• Sequence: 15 - AGGACGAGCUAGCUGAGUGCUG - 36
• Evidence: experimental ; Illumina [1-2]

Mature mmu-miR-1947-3p

• Accession: MIMAT0017343
• Description: Mus musculus mmu-miR-1947-3p mature miRNA
• Sequence: 51 - GCACUGAGCUAGCUCUCCCUCC - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797