Stem-loop bta-mir-365-2

Accession

MI0009812

Description

Bos taurus bta-mir-365-2 precursor miRNA

Gene family

MIPF0000061; mir-365

Literature search

6 open access papers mention bta-mir-365-2
(16 sentences)

Sequence

5329 reads, 137 reads per million, 66 experiments

agagugcucgaggacagcaagaaaaaugagggacuuucaggggcagcuguguuuucugacucagucaUAAUGCCCCUAAAAAUCCUUAUuguucuugcagugugcaucagg
...((((....(.((.(((((((.((((((((..(((.(((((((((((.(((....))).)))).....))))))).))).)))))))).))))))).)).)))))....

Structure

-aga    ucga g  a       a        ac   c       -----    u   u 
    gugc    g ac gcaagaa aaugaggg  uuu aggggca     gcug guu u
    ||||    | || ||||||| ||||||||  ||| |||||||     |||| |||  
    uacg    u ug cguucuu uUAUUCCU  AAA UCCCCGU     ugac cag c
ggac    ---- g  a       g        -A   A       AAUac    u   u 

Annotation confidence Not enough data

Genome context

chr19: 18918387-18918497 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-365-2

Mature bta-miR-365-3p

• Accession: MIMAT0004341
• Description: Bos taurus bta-miR-365-3p mature miRNA
• Sequence: 68 - UAAUGCCCCUAAAAAUCCUUAU - 89
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125