Stem-loop bta-mir-190a

Accession

MI0009762

Description

Bos taurus bta-mir-190a precursor miRNA

Literature search

5 open access papers mention bta-mir-190a
(14 sentences)

Sequence

643 reads, 10 reads per million, 65 experiments

ugcaggccucugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaacuauauaucaaacauauuccuacagugucuugcc
.(((((.(.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).).))))).

Structure

u     c u     -U                UA     uuau 
 gcagg c cugug  GAUAUGUUUGAUAUAU  GGUug    u
 ||||| | |||||  ||||||||||||||||  |||||     
 cguuc g gacau  uuauacaaacuauaua  ucaac    u
c     u u     cc                --     cuaa 

Annotation confidence High

Genome context

chr10: 47479144-47479228 [-]

Mature bta-miR-190a

• Accession: MIMAT0009251
• Description: Bos taurus bta-miR-190a mature miRNA
• Sequence: 15 - UGAUAUGUUUGAUAUAUUAGGU - 36
• Evidence: experimental ; Array [3], qRT-PCR [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125