Stem-loop bta-mir-146b

Accession

MI0009745

Description

Bos taurus bta-mir-146b precursor miRNA

Literature search

102 open access papers mention bta-mir-146b
(415 sentences)

Sequence

3026707 reads, 1488.0 reads per million, 321 experiments

uaagagaacuuuggccaccuggcucUGAGAACUGAAUUCCAUAGGCUGUgagcucuagcaaaUGCCCUAGGGACUCAGUUCUGGUgcccggcugugcuacaccauc
...........((((((((.(((.((.((((((((.((((.((((.(((..((....))..))).)))))))).)))))))))).))).)).)).)))).......

Structure

uaagagaacuu    -  -  u   u  G        A    A    C   ga  u 
           uggc ca cc ggc cU AGAACUGA UUCC UAGG UGU  gc c
           |||| || || ||| || |||||||| |||| |||| |||  ||  
           aucg gu gg ccg GG UCUUGACU AGGG AUCC GUa  cg u
----cuaccac    u  c  c   U  -        C    -    C   aa  a 

Annotation confidence High

Genome context

26: 23057605-23057710 [+]

Mature bta-miR-146b-5p

• Accession: MIMAT0009235
• Description: Bos taurus bta-miR-146b-5p mature miRNA
• Sequence: 26 - UGAGAACUGAAUUCCAUAGGCUGU - 49
• Evidence: not_experimental

Mature bta-miR-146b-3p

• Accession: MIMAT0050820
• Description: Bos taurus bta-miR-146b-3p mature miRNA
• Sequence: 63 - UGCCCUAGGGACUCAGUUCUGGU - 85
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125