Stem-loop dvi-mir-92a

Accession

MI0009547

Description

Drosophila virilis dvi-mir-92a precursor miRNA

Literature search

1 open access papers mention dvi-mir-92a
(7 sentences)

Sequence

aacugcuugcAGGACGGGAAGGUGUCAACGUUuugcuuuaugaaucaaaCAUUGCACUUGUCCCGGCCUAUgagcgguuug
(((((((((.(((.((((((((((.(((.((((.............)))).)))))))).))))).))).)))))))))..

Structure

--         c   A     -     U   C    ugcuu 
  aacugcuug AGG CGGGA AGGUG CAA GUUu     u
  ||||||||| ||| ||||| ||||| ||| ||||     a
  uuggcgagU UCC GCCCU UUCAC GUU Caaa     u
gu         A   G     G     -   A    cuaag 

Annotation confidence Not enough data

Genome context

scaffold_12855: 6880792-6880872 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-92a

Mature dvi-miR-92a-3p

• Accession: MIMAT0008979
• Description: Drosophila virilis dvi-miR-92a-3p mature miRNA
• Sequence: 50 - CAUUGCACUUGUCCCGGCCUAU - 71
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-92a-5p

• Accession: MIMAT0032099
• Description: Drosophila virilis dvi-miR-92a-5p mature miRNA
• Sequence: 11 - AGGACGGGAAGGUGUCAACGUU - 32
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372