Stem-loop dse-mir-2b-2

Accession

MI0009345

Description

Drosophila sechellia dse-mir-2b-2 precursor miRNA

Sequence

6555 reads, 2063.0 reads per million, 1 experiments

uugugucaUUCUUCAAAGUGGUUGUGAAAUGUuugccuuuuuaugccuauucaUAUCACAGCCAGCUUUGAGGAGCgacgcga
(((((((.(((((((((((((((((((.(((...((........)).....))).))))))))).)))))))))).)))))))

Structure

       a          -         A   --Uuu  cuu 
uuguguc UUCUUCAAAG UGGUUGUGA AUG     gc   u
||||||| |||||||||| ||||||||| |||     ||    
agcgcag GAGGAGUUUC ACCGACACU Uac     cg   u
       C          G         A   uuauc  uau 

Annotation confidence High

Genome context

scaffold_7: 3184535-3184617 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dse-mir-2b-2

Mature dse-miR-2b-2-5p

• Accession: MIMAT0053457
• Description: Drosophila sechellia dse-miR-2b-2-5p mature miRNA
• Sequence: 9 - UUCUUCAAAGUGGUUGUGAAAUGU - 32
• Evidence: not_experimental

Mature dse-miR-2b-3p

• Accession: MIMAT0008780
• Description: Drosophila sechellia dse-miR-2b-3p mature miRNA
• Sequence: 54 - UAUCACAGCCAGCUUUGAGGAGC - 76
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218