Stem-loop dse-mir-263a

Accession

MI0009330

Description

Drosophila sechellia dse-mir-263a precursor miRNA

Sequence

423073 reads, 133168.0 reads per million, 1 experiments

gaucucgacacaguuAAUGGCACUGGAAGAAUUCACGGGguaauuuuuauacaaccCGUGAUCUCUUAGUGGCAUCUAUGGugcgagaau
..(((((.(((.((..(((.((((((.(((..(((((((...............)))))))))).)))))).)))..)).))))))))..

Structure

ga     a   a  uA   G      A   AU       guaauu 
  ucucg cac gu  AUG CACUGG AGA  UCACGGG      u
  ||||| ||| ||  ||| |||||| |||  |||||||      u
  agagc guG UA  UAC GUGAUU UCU  AGUGCcc      u
ua     -   G  UC   G      C   --       aacaua 

Annotation confidence Medium

Genome context

scaffold_16: 152701-152790 [-]

Mature dse-miR-263a-5p

• Accession: MIMAT0053452
• Description: Drosophila sechellia dse-miR-263a-5p mature miRNA
• Sequence: 16 - AAUGGCACUGGAAGAAUUCACGGG - 39
• Evidence: not_experimental

Mature dse-miR-263a-3p

• Accession: MIMAT0008768
• Description: Drosophila sechellia dse-miR-263a-3p mature miRNA
• Sequence: 57 - CGUGAUCUCUUAGUGGCAUCUAUGG - 81
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218