Stem-loop dpe-mir-31a

Accession

MI0009277

Description

Drosophila persimilis dpe-mir-31a precursor miRNA

Sequence

ucuguugguaaauUGGCAAGAUGUCGGCAUAGCUGAaguugaaaagcgaucuuugagaacgcuaugcugcaucuagucaguuauucaaugga
((((((((..(((((((.(((((.(((((((((((((((((.....))).))))).....)))))))))))))).)))))))..))))))))

Structure

        ua       A     U         -----     -   a 
ucuguugg  aauUGGC AGAUG CGGCAUAGC     UGAag uug a
||||||||  ||||||| ||||| |||||||||     ||||| ||| a
agguaacu  uugacug ucuac gucguaucg     guuuc agc a
        ua       a     -         caaga     u   g 

Annotation confidence Low

Genome context

scaffold_4: 279001-279092 [+]

Mature dpe-miR-31a

• Accession: MIMAT0008723
• Description: Drosophila persimilis dpe-miR-31a mature miRNA
• Sequence: 14 - UGGCAAGAUGUCGGCAUAGCUGA - 36
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218