miRBase entry: dgr-mir-2a-2

Stem-loop dgr-mir-2a-2


Accession
MI0009165
Description
Drosophila grimshawi dgr-mir-2a-2 precursor miRNA


Sequence

aucuaagccucaucaagugguugugauauggauacccgacgcaUAUCACAGCCAGCUUUGAUGAGCuaggau
((((.(((.(((((((((((((((((((((...........)))))))))))))..))))))))))).))))

Structure
    a   c        --             gaua 
aucu agc ucaucaag  ugguugugauaug    c
|||| ||| ||||||||  |||||||||||||    c
uagg uCG AGUAGUUU  ACCGACACUAUac    c
    a   -        CG             gcag 


Annotation confidence Not enough data
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Genome context
scaffold_15126: 521957-522028 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dgr-mir-2a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dgr-miR-2a

Accession MIMAT0008607
Description Drosophila grimshawi dgr-miR-2a mature miRNA
Sequence 44 - UAUCACAGCCAGCUUUGAUGAGC - 66
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218