Stem-loop dgr-mir-13b-1

Accession

MI0009151

Description

Drosophila grimshawi dgr-mir-13b-1 precursor miRNA

Sequence

ccaugucguuaaaaugcuugugaccuuauguauuuuauaucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((..........)))))))))).)))))))))))...)))

Structure

   -ug           c      ccu    uauu 
cca   ucguuaaaaug uuguga   uaug    u
|||   ||||||||||| ||||||   ||||     
ggu   AGCAGUUUUAC GACACU   AUac    u
   uUG           C      ---    uaua 

Annotation confidence Not enough data

Genome context

scaffold_14906: 4357504-4357571 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dgr-mir-13b-1

Mature dgr-miR-13b

• Accession: MIMAT0008605
• Description: Drosophila grimshawi dgr-miR-13b mature miRNA
• Sequence: 43 - UAUCACAGCCAUUUUGACGAGU - 64
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218