miRBase entry: dgr-mir-277

Stem-loop dgr-mir-277

Accession

MI0009099

Description

Drosophila grimshawi dgr-mir-277 precursor miRNA

Gene family

MIPF0000156; mir-277

Sequence

caguuuugggcugcgugucaggagugcauuugcacugaaacauucugaaagcuugUAAAUGCACUAUCUGGUACGACAuuccagaacgu
..((((((((.(((((((((((((((((((((((((.............))..)))))))))))).))))))))).)).))))))))..

Structure

ca        c  -         -            --  gaaac 
  guuuuggg ug cgugucagg agugcauuugca  cu     a
  |||||||| || ||||||||| ||||||||||||  ||     u
  caagaccu AC GCAUGGUCU UCACGUAAAUgu  ga     u
ug        u  A         A            uc  aaguc

Annotation confidence Not enough data

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Genome context

scaffold_14624: 2266198-2266286 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dgr-mir-277

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dgr-miR-277

Accession	MIMAT0008556
Description	Drosophila grimshawi dgr-miR-277 mature miRNA
Sequence	56 - UAAAUGCACUAUCUGGUACGACA - 78
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218