miRBase entry: dan-mir-133

Stem-loop dan-mir-133

Accession

MI0009005

Description

Drosophila ananassae dan-mir-133 precursor miRNA

Sequence

ugcaacgcuguauguagcugguugacaucgggucagaucuaucuuuucaagcauUUGGUCCCCUUCAACCAGCUGUagcagugguugau
..(((((((((.(((((((((((((....(((((((((((.........)).)))))).)))..)))))))))))))))))).))))..

Structure

ug    -     a             cauc   -      -  auc 
  caac gcugu uguagcugguuga    ggg ucagau cu   u
  |||| ||||| |||||||||||||    ||| |||||| ||   u
  guug ugacg aUGUCGACCAACU    CCC GGUUua ga   u
ua    g     -             --UC   U      c  acu

Annotation confidence Not enough data

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Genome context

scaffold_12916: 7117525-7117613 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dan-mir-133

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-133

Accession	MIMAT0008468
Description	Drosophila ananassae dan-miR-133 mature miRNA
Sequence	55 - UUGGUCCCCUUCAACCAGCUGU - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218