Stem-loop dan-mir-281-1

Accession

MI0008987

Description

Drosophila ananassae dan-mir-281-1 precursor miRNA

Sequence

cgaauacgugaauaAAGAGAGCUGUCCGUCGACAGUccagauaccuauaacacUGUCAUGGAAUUGCUCUCUUUGUauaauauucg
((((((.....(((((((((((..(((((.((((((...............)))))))))))...)))))))))))....))))))

Structure

      cguga           -UG     C      ccagau 
cgaaua     auaAAGAGAGC   UCCGU GACAGU      a
||||||     |||||||||||   ||||| ||||||      c
gcuuau     UGUUUCUCUCG   AGGUA CUGUca      c
      -aaua           UUA     -      caauau 

Annotation confidence Not enough data

Genome context

scaffold_13266: 2568753-2568838 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dan-mir-281-1

Mature dan-miR-281-3p

• Accession: MIMAT0008429
• Description: Drosophila ananassae dan-miR-281-3p mature miRNA
• Sequence: 54 - UGUCAUGGAAUUGCUCUCUUUGU - 76
• Evidence: not_experimental

Mature dan-miR-281-1-5p

• Accession: MIMAT0008428
• Description: Drosophila ananassae dan-miR-281-1-5p mature miRNA
• Sequence: 15 - AAGAGAGCUGUCCGUCGACAGU - 36
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218