miRBase entry: tca-mir-263b

Stem-loop tca-mir-263b


Accession
MI0008920
Description
Tribolium castaneum tca-mir-263b precursor miRNA


Sequence

cuuacgaacCUUGGCACUGGAAGAAUUCACagauuguauuugaaucGUGAUUCUUUUAAUGCCAUAUuucguggg
((((((((...(((((.(((((((((.(((.((((.......)))))))))))))))).)))))...))))))))

Structure
        cCU     C         U   a    gu 
cuuacgaa   UGGCA UGGAAGAAU CAC gauu  a
||||||||   ||||| ||||||||| ||| ||||  u
gggugcuu   ACCGU AUUUUCUUA GUG cuaa  u
        UAU     A         -   -    gu 


Annotation confidence Not enough data
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Genome context
ChLG3: 4441784-4441858 [+]

Database links

Mature tca-miR-263b-5p

Accession MIMAT0008378
Description Tribolium castaneum tca-miR-263b-5p mature miRNA
Sequence 10 - CUUGGCACUGGAAGAAUUCAC - 30
Evidence experimental
SOLID [2]
Database links

Mature tca-miR-263b-3p

Accession MIMAT0019122
Description Tribolium castaneum tca-miR-263b-3p mature miRNA
Sequence 47 - GUGAUUCUUUUAAUGCCAUAU - 67
Evidence experimental
SOLID [2]
Database links

References

  1. PubMed ID: 18651924
    In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)
    "Singh J, Nagaraju J"
    "Insect Mol Biol (2008) 17:427-436

  2. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696