Stem-loop ptr-mir-622

Accession

MI0008820

Description

Pan troglodytes ptr-mir-622 precursor miRNA

Literature search

1 open access papers mention ptr-mir-622
(3 sentences)

Sequence

17 reads, 1.0 reads per million, 11 experiments

gagaagcuggacaaguauuggucucagcagauugaagagagcaccacaguggucaucacACAGUCUGCUGAGGUUGGAGCugcuaagaugacgcu
.((.((((.(((..........((((((((((((..((((.(((....))).)).))...)))))))))))))))..)))).))...........

Structure

----------g  a    -g   aaguauuggu            -aa  -  g   c 
           ag agcu  gac          cucagcagauug   ga ga cac a
           || ||||  |||          ||||||||||||   || || |||  
           uc uCGA  UUG          GAGUCGUCUGAC   cu cu gug c
ucgcaguagaa  g    GG   ----------            Aca  a  g   a 

Annotation confidence Not enough data

Genome context

chr13: 75834020-75834114 [+]

Mature ptr-miR-622-3p

• Accession: MIMAT0008283
• Description: Pan troglodytes ptr-miR-622-3p mature miRNA
• Sequence: 60 - ACAGUCUGCUGAGGUUGGAGC - 80
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70