Stem-loop ptr-mir-502

Accession

MI0008697

Description

Pan troglodytes ptr-mir-502 precursor miRNA

Sequence

gcucccccucucuaAUCCUUGCUAUCUGGGUGCUAgugcuggcucaaugcaaugcaccugggcaaggauucagagagggggagcu
((((((((((((((((((((((...((((((((...(((.........)))..))))))))))))))))).))))))))))))).

Structure

-             -         UAU        UAg   ugg 
 gcucccccucucu aAUCCUUGC   CUGGGUGC   ugc   c
 ||||||||||||| |||||||||   ||||||||   |||   u
 cgagggggagaga uuaggaacg   gguccacg   acg   c
u             c         ---        -ua   uaa 

Annotation confidence Not enough data

Genome context

chrX: 49899352-49899436 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ptr-mir-502

Mature ptr-miR-502

• Accession: MIMAT0008175
• Description: Pan troglodytes ptr-miR-502 mature miRNA
• Sequence: 15 - AUCCUUGCUAUCUGGGUGCUA - 35
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70