Stem-loop ptr-mir-122

Accession

MI0008431

Description

Pan troglodytes ptr-mir-122 precursor miRNA

Literature search

9 open access papers mention ptr-mir-122
(256 sentences)

Sequence

cuuagcagagcugUGGAGUGUGACAAUGGUGUUUGugucuaaauuaucaaacgccauuaucacacuaaauagcuacugcuaggc
((((((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))))).

Structure

-        -      GG       C           ugucu 
 cuuagcag agcugU  AGUGUGA AAUGGUGUUUG     a
 |||||||| ||||||  ||||||| |||||||||||      
 ggaucguc ucgaua  ucacacu uuaccgcaaac     a
c        a      aa       a           uauua 

Annotation confidence Not enough data

Genome context

chr18: 55851820-55851903 [+]

Mature ptr-miR-122

• Accession: MIMAT0007963
• Description: Pan troglodytes ptr-miR-122 mature miRNA
• Sequence: 14 - UGGAGUGUGACAAUGGUGUUUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70