Stem-loop ptr-mir-101-2

Accession

MI0008408

Description

Pan troglodytes ptr-mir-101-2 precursor miRNA

Sequence

636847 reads, 5492.0 reads per million, 24 experiments

cuguccuuuuUCGGUUAUCAUGGUACCGAUGCUguauaucugaaaggUACAGUACUGUGAUAACUGAAGaaugguggu
(((.((((((((((((((((((((((.(.((((............))))).)))))))))))))))))))).))))).

Structure

-   u  -                    C A    guaua 
 cug cc uuuuUCGGUUAUCAUGGUAC G UGCU     u
 ||| || |||||||||||||||||||| | ||||      
 ggu gg aaGAAGUCAAUAGUGUCAUG C AUgg     c
u   -  u                    A -    aaagu 

Annotation confidence Not enough data

Genome context

chr9: 4889298-4889375 [+]

Mature ptr-miR-101-2-5p

• Accession: MIMAT0052216
• Description: Pan troglodytes ptr-miR-101-2-5p mature miRNA
• Sequence: 11 - UCGGUUAUCAUGGUACCGAUGCU - 33
• Evidence: not_experimental

Mature ptr-miR-101-3p

• Accession: MIMAT0002430
• Description: Pan troglodytes ptr-miR-101-3p mature miRNA
• Sequence: 48 - UACAGUACUGUGAUAACUGAAG - 69
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70