miRBase entry: ssc-mir-130a

Stem-loop ssc-mir-130a

Sus scrofa ssc-mir-130a precursor miRNA
Gene family
MIPF0000034; mir-130

Literature search
10 open access papers mention ssc-mir-130a
(19 sentences)


32 reads, 31 reads per million, 7 experiments

  -      a        c          a   ucugca 
cg ggccgg gcucuuuu acauugugcu cug      c
|| |||||| |||||||| |||||||||| |||       
gc ccgguU CGGGAAAA UGUAACGUGA gau      c
  a      A        U          C   cacuau 

Annotation confidence Not enough data
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Genome context
chr2: 12929884-12929962 [-]

Database links

Mature ssc-miR-130a

Accession MIMAT0007758
Description Sus scrofa ssc-miR-130a mature miRNA
Evidence experimental
cloned [1,3], Illumina [2,4-5]


  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 20180025
    Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
    "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
    "Mol Biol Rep (2010) 37:3567-3574

  3. PubMed ID: 18548309
    Identification and characterization of new microRNAs from pig
    "Kim J, Cho IS, Hong JS, Choi YK, Kim H, Lee YS"
    "Mamm Genome (2008) 19:570-580

  4. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  5. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100