Accession
MI0008212
Description
Sus scrofa
ssc-mir-16-2 precursor miRNA
Literature search
23 open access papers mention ssc-mir-16-2
(52 sentences)
(52 sentences)
Sequence
7435685
reads,
4034.0
reads per million, 214 experiments
cagugccuUAGCAGCACGUAAAUAUUGGCGuuaagauucuaaaauuaucuCCAGUAUUAACUGUGCUGCUGAAguaagg
...(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))...
...(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))...
Structure
cag c - A C u gauu ugc uUAGCAGCAC GU AAUAUUGG G uaa c ||| |||||||||| || |||||||| | ||| aug AGUCGUCGUG CA UUAUGACC c auu u gga A U A u u aaaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrUScaf2048: 70557-70635 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-16-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-16-5p
| Accession | MIMAT0007754 |
| Description | Sus scrofa ssc-miR-16-5p mature miRNA |
| Sequence | 9 - UAGCAGCACGUAAAUAUUGGCG - 30 |
| Evidence |
experimental
cloned [1,3], Illumina [2,4-5] |
Mature ssc-miR-16-2-3p
| Accession | MIMAT0052591 |
| Description | Sus scrofa ssc-miR-16-2-3p mature miRNA |
| Sequence | 51 - CCAGUAUUAACUGUGCUGCUGAA - 73 |
| Evidence |
experimental
cloned [1,3], Illumina [2,4-5] |
References
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