Stem-loop cfa-mir-423a

Accession

MI0008166

Description

Canis lupus familiaris cfa-mir-423a precursor miRNA

Sequence

1980903 reads, 2769.0 reads per million, 82 experiments

UGAGGGGCAGAGAGCGAGACUUUucuauuuuccaaaAGCUCGGUCUGAGGCCCCUCAGU
((((((((..(((.((((.(((((.........))))))))).)))...))))))))..

Structure

--        -AG   G    A     cua 
  UGAGGGGC   AGA CGAG CUUUu   u
  ||||||||   ||| |||| |||||   u
  ACUCCCCG   UCU GCUC GAaaa   u
UG        GAG   G    -     ccu 

Annotation confidence High

Genome context

9: 44974048-44974106 [+]

Mature cfa-miR-423a-5p

• Accession: MIMAT0006742
• Description: Canis lupus familiaris cfa-miR-423a-5p mature miRNA
• Sequence: 1 - UGAGGGGCAGAGAGCGAGACUUU - 23
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-423a-3p

• Accession: MIMAT0051862
• Description: Canis lupus familiaris cfa-miR-423a-3p mature miRNA
• Sequence: 37 - AGCUCGGUCUGAGGCCCCUCAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415