Stem-loop cfa-mir-140

Accession

MI0008100

Description

Canis familiaris cfa-mir-140 precursor miRNA

Sequence

cagugguuuuacccuaugguagguuacgucaugcuguucuACCACAGGGUAGAACCACGGA
..(((((((((((((.(((((((.((.((...)))).))))))).)))))))))))))...

Structure

-ca             a       u  c  c 
   gugguuuuacccu ugguagg ua gu  
   ||||||||||||| ||||||| || || a
   CACCAAGAUGGGA ACCAucu gu cg  
AGG             C       u  -  u 

Annotation confidence Not enough data

Genome context

chr5: 79814256-79814316 [-]

Mature cfa-miR-140

• Accession: MIMAT0006689
• Description: Canis familiaris cfa-miR-140 mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415